29 dependents
| Package | Description | Downloads/month |
|---|---|---|
| A BioIO reader plugin for reading CZI files. | 11K | |
| spaCR Spatial phenotype analysis of CRISPR–Cas9 screens (spaCR) | 5K | |
| A Python-based tool for parallelized conversion of image datasets from various f... | 3K | |
| 2K | ||
| Minimal app for big fish. | 2K | |
| Read and process histological slide images with python! | 2K | |
| Obsessive Coder's Dependency Toolkit — Python utilities for array manipulation, ... | 1K | |
| A Python-based GUI for Histological E-data Registration in Brain Space | 1K | |
| DMC-BrainMap is an end-to-end tool for multi-feature brain mapping across specie... | 1K | |
| Spatial phenotype analysis of crisp screens (SpaCr) | 1K | |
| A plugin that enables organelle segmentation and analysis | 776 | |
| Brainways | 774 | |
| Brainways | 744 | |
| Bacterial segmentation and analysis platform than can inport/export files in mul... | 705 | |
| A continuation of napari-psf-analysis for CFIM | 563 | |
| Biomedical image metadata extraction tool | 504 | |
| UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Li... | 423 | |
| A plugin that enables annotations provided by Allen Institute for Cell Science | 410 | |
| Collection of python powered image-processing functions | 385 | |
| Python Calcium Recording Analysis and Inference Toolbox | 310 | |
| Reproduce the appearance of CZI files (coloring raw data) seen in Zeiss Zen soft... | 252 | |
| A Czi reader plugin for napari | 198 | |
| A package for converting CZI to TIFF files | 176 | |
| Locate bacteria in CLSM obtained infected bone tissue images | 149 | |
| Airyscan multi-array detector high resolution image reconstruction | 144 | |
| Modified version of Valis used for HEST. Please visit the original Valis repo fo... | 115 | |
| A pipeline for stuff #TODO: Get knowledge to write a proper description Pitcount | 87 | |
| Core library for neutrophils classification with unified 2D/3D model interface | 85 | |
| Python Condensate Analysis Toolbox (PyCAT) for bio-image analysis, especially bi... | 63 |
