53 dependents
| Package | Description | Downloads/month |
|---|---|---|
| MELAGE: An open-source Python toolkit for medical imaging (3D MRI & 3D ultrasoun... | 4K | |
| Skullduggery: defacing BIDS-app for MRI data. | 4K | |
| multi-channel/time-series medical image processing with antspyx | 4K | |
| Package to support the research of LIOM. | 4K | |
| Utilities for working with ZARR files and AIND metadata | 4K | |
| T1w human neuroimage processing with antspyx | 3K | |
| Pre-trained models and utilities for deep learning on medical images in Python (... | 3K | |
| Label Augmented Modality Agnostic Registration (LAMAReg) is a MRI resgistration ... | 3K | |
| A CLI wrapper for TorchIO and ANTsPyX for NIfTI image processing | 3K | |
| Torso Processing ToolBox | 3K | |
| Tools to work with anatomically-aware files | 3K | |
| Software platform for clinical neuroimaging studies | 2K | |
| Tools for registering volumes | 2K | |
| preprocessing tools for multi-modal 3D brain imaging | 2K | |
| Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2 | 2K | |
| 2K | ||
| convert ephys data for use in ibl gui | 1K | |
| PET-PAL (Positron Emission Tomography Processing and Analysis Library) | 1K | |
| MIST is a simple and scalable end-to-end framework for medical imaging segmentat... | 1K | |
| Library to prepare histology and ephys for the IBL ephys alignment GUI | 916 | |
| A quick to use library to process images for MRI Arterial Spin Labeling imaging ... | 792 | |
| CoCoLIT: ControlNet-Conditioned Latent Image Translation for MRI to Amyloid PET ... | 747 | |
| Analysis toolbox for cerebellar fMRI data in Python | 676 | |
| This is a segmentation pipeline to automatically, and robustly, segment the whol... | 649 | |
| Python script based on ANTs to locate (center & crop) any region given in the Ce... | 638 | |
| A simple yet exhaustive segmentation tool of the Hippocampal Subfields in T1w an... | 574 | |
| Main model and preprocessing code | 572 | |
| TibblingAI Codebase | 568 | |
| Automatic Brain Extraction Tools | 541 | |
| UNRAVEL: UN-biased high-Resolution Analysis and Validation of Ensembles using Li... | 423 | |
| Leonardo: an LSFM image processing toolset | 411 | |
| Build unbiased anatomical templates from individual images | 401 | |
| MICAFlow MRI processing pipeline | 387 | |
| Medical Image Analysis Tools (MIA-Tools) | 363 | |
| 348 | ||
| Medical Image Analysis Tools (MIA-Tools) | 308 | |
| bids app using deepMReye to decode eye motion for fMRI time series data | 286 | |
| pyMEAL: Multi-Encoder-Augmentation-Aware-Learning | 284 | |
| Blue Brain multi-modal registration and alignment toolbox | 244 | |
| Raidionics reporting and data system backend (RADS) | 217 | |
| A deep learning based method to segment deep brain structures from T1w MRI | 213 | |
| SynthBA: Reliable Brain Age Estimation Across Multiple MRI Sequences and Resolut... | 203 | |
| Streamline Density Normalization (SDNorm) | 181 | |
| Automatic Brain Parcellation Tools | 166 | |
| A streamlined wrapper for ANTsPyMM tailored for antsxbids BIDS output | 163 | |
| Train medical imaging AI models locally or in the cloud with any framework | 162 | |
| Brain Parcellation Tools | 150 | |
| End-to-end SnakeBIDS workflow for landmark regression and derivative apps | 147 | |
| Anatomical curvature processing for medical images. | 141 | |
| xai4mri is designed for advanced MRI analysis using deep learning combined with ... | 111 |
