17 dependents
| Package | Description | Downloads/month |
|---|---|---|
| exprmat: Routines for expression matrices | 14K | |
| scXpand: detection of T-cell clonal expansion from single-cell RNA sequencing | 2K | |
| Consensus prediction of cell type labels with popV | 2K | |
| scXpand: detection of T-cell clonal expansion from single-cell RNA sequencing | 1K | |
| Scripts for using scanpy | 1K | |
| scBOA: scRNA-seq Bayesian Optimization and Analysis pipeline | 1K | |
| A unified DEep-learning and SIngle-cell based DEconvolution method for solid tum... | 722 | |
| Graph-based age dependency analysis on scVI latent space with Moran's I, ADI, dC... | 570 | |
| sclab | 553 | |
| CLI for the scanpy package | 407 | |
| BENchmarking Transformer-Obtained Single-Cell embeddings | 401 | |
| Convenient and user-friendly package to streamline common workflows in single-ce... | 394 | |
| Panpipes - multimodal single cell pipelines | 391 | |
| EMERGENE for individual cell-based differential transcriptomic analysis across c... | 230 | |
| scDistill: Knowledge distillation for single-cell batch correction with covariat... | 211 | |
| A toolkit package of data integration | 119 | |
| TISCOPE | 100 |
