24 dependents
Package Description Downloads/month
๐Ÿช What's the latest version for each database? 187K
Structure your data in a FAIR way using google sheets or TSVs. These are then co... 10K
๐Ÿ‡ Ensmallen is the Rust/Python high-performance graph processing submodule of th... 10K
๐Ÿ“› A Python package for using ontologies, terminologies, and biomedical nomenclat... 8K
MetabolomicsHub Common Data Model 7K
Python package for interacting with Monarch Initiative knowledge graph 7K
Validation of Translator OpenAPI (TRAPI) messages both to TRAPI and Biolink Mode... 4K
๐Ÿ—บ๏ธ Community curated and predicted equivalences and related mappings between nam... 4K
๐Ÿ‡ GRAPE is a Rust/Python Graph Representation Learning library for Predictions a... 3K
a tool for mapping free-text descriptions of entities to ontology terms 3K
Prediction and curation of semantic mappings in SSSOM 2K
๐Ÿท๏ธ Unified access to biomedical ontologies 2K
Python package for biodatafuse project. 1K
This is the project description. 1K
๐Ÿ›ฃ๏ธ Semantic Mapping Reasoning Assembler (SeMRA): tooling for semantic mappings 841
refineGEMs: a python package intended to help with the curation of genome-scale ... 799
โ˜Ž๏ธ A decentralized database of synonyms for biomedical concepts 547
๐Ÿ“˜ Generate and apply coherent biomedical lexical indices for NER and NEN 369
Get ORCID in bulk, free it from XML, and semantically enrich it 317
Integration between the Bioregistry and Pydantic type annotations. 243
Generate, export and use RDF schemas. 141
Assemble biomedical knowledge 125
oakx-grape 123
Assess the quality of biomedical ontologies 101