55 dependents
Package Description Downloads/month
A Python package to manage extremely large amounts of data 2.6M
Super cool utilities that we just love to use 101K
nnU-Net is a framework for out-of-the box image segmentation. 87K
qupled: a package to investigate quantum plasmas via the dielectric formalism 15K
OCF Blosc2 is a codec for numcodecs for compressing image data in Zarr/Xarray 11K
Pythonic and parallelizable I/O for N-dimensional imaging data with OME metadata 10K
Description of my package 4K
NeuroPoly fork of nnU-Net 4K
Blosc2 plugin for grok 4K
Btune plugin for Blosc2. Automatically choose the best codec/filter for your dat... 3K
A Python library for multi-object tracking data structures and algorithms 3K
A Python-based tool for parallelized conversion of image datasets from various f... 3K
EarthOne Python Client 2K
Package to use nnUNet on 3D Slicer 2K
Array format specialized for Machine Learning with Blosc2 backend and standardiz... 2K
Large-scale multi-hypotheses cell tracking 2K
A repository that allows users to apply the DLICV method to their brain imaging ... 904
Pyxations: a Python-based toolbox to organize, parse, and analyse eye-movement d... 834
MAGDI Segmentation Models 3D 814
Data processing for Dogma 784
ProkBERT 771
661
A unified Python toolkit for managing, processing, and analyzing 2D and 3D visio... 634
CRASHS: Cortical Reconstruction for Automatic Segmentation of Hippocampal Subfie... 587
REST and on-demand access to local/remote Blosc2 data repositories 524
Transparent optimized reading of n-dimensional Blosc2 slices for h5py 500
Plugin of the OpenHTJ2K codec for the C-Blosc2 library 488
A Python module for running workflows on a Slurm cluster. 462
Distributed behavioral experiments 427
A parallel HDF5-based archiving tool. 420
399
Python package for processing LEGEND-200 data 378
The pLAtYpus model for engagement levels of stakeholders 341
Population Synthesis (for ActivitySim) 339
Qualia toolchain Core 269
A standardized blosc2 image reader and writer for medical images. 247
240
221
An advanced neural network framework with interpretability, generalization, robu... 214
NCDLMUSE - A BIDS-App wrapper for NiChart DLMUSE for brain segmentation and ICV ... 203
192
a package for backtesting and factor analysis 187
153
SMLP - The Symbolic Machine Learning Prover 149
OpenZL plugin for Blosc2. 145
Create a computer vision app FAST! Multiprocessing made easy, right out of the b... 142
A python program to automatically detect fish sounds in passive acoustic recordi... 134
nnU-Net is a framework for out-of-the box image segmentation. 117
TOPOS: Target Organ Prediction of Scout Views for Automated CT Scan Planning 113
nnU-Net is a framework for out-of-the box image segmentation. 112