20 dependents
| Package | Description | Downloads/month |
|---|---|---|
| StarDist - Object Detection with Star-convex Shapes | 34K | |
| Accurate and efficient spot detection for microscopy data | 6K | |
| A napari plugin for drawing PALM RoboSoftware elements using StarDist segmentati... | 4K | |
| All the tools used by the Towbin Lab ! | 3K | |
| Single Cell Extraction and Morphological Analysis of Whole Slide Images | 3K | |
| Common code for the Lenstra lab. | 2K | |
| Multiplexed DNA-FISH data analysis pipeline | 2K | |
| CenFind is a pipeline to automatically score centrioles in cells. | 2K | |
| This is the implementation of Noise2Void training. | 1K | |
| Napari Hydra Plugin - GUI-based nested object detection | 986 | |
| A package for segmenting micronuclei in microscopy images | 824 | |
| MyoQuant🔬: a tool to automatically quantify pathological features in muscle fibe... | 768 | |
| 763 | ||
| StarDist - Object Detection with Star-convex Shapes | 525 | |
| Spatiotemporal modeling of spatial transcriptomics | 488 | |
| Fractal tasks for the Opera/Operetta microscope and drug profiling | 485 | |
| A deep-learning pipeline for automated lung segmentation in mice CT scans, aidin... | 479 | |
| Implementation of NAGINI-3D, a python package designed for Multi-Object Segmenta... | 353 | |
| Comprehensive spatial transcriptomics analysis library with advanced segmentatio... | 237 | |
| Framework for Cell & Region Image Segmentation/Classification | 37 |
