85 dependents
Package Description Downloads/month
SMAC3: A Versatile Bayesian Optimization Package for Hyperparameter Optimization 31K
CARS is a dedicated and open source 3D tool to produce Digital Surface Models fr... 15K
ESMValCore: A community tool for pre-processing data from Earth system models in... 8K
Repository with configuration setup of a prototype of analysis facility - "coffe... 8K
PIVTOOLs - Particle Image Velocimetry Tools with CLI and GUI 7K
Plant phenotyping with image analysis 6K
Python 3 framework to facilitate verification, validation and uncertainty quanti... 4K
Single Cell Extraction and Morphological Analysis of Whole Slide Images 3K
3K
A Python-based tool for parallelized conversion of image datasets from various f... 3K
Unified tool for mesh generation, multiresolution mesh creation, skeletonization... 2K
An automated scoring function to facilitate and standardize the evaluation of go... 2K
Tools to help find neural circuits 2K
Code to perform analysis on segmentations like those produced by CellMap 2K
Miami InSAR time-series software in Python 2K
Wrappers around dask-jobqueue functions for specific clusters 2K
Analyze, visualize, and understand I/O performance issues in HPC workflows 2K
This project automates the fetching and extraction of weather data from multiple... 2K
Blind sparse hemodynamic deconvolution methods for fMRI data 2K
A python package to make realistic simulations of ALMA observations of galaxies ... 2K
meta package to install dependecies needed for `pyrosetta.distributed` framework 2K
2K
A Python based soft to launch neuroimaging containers on clusters 1K
Dask binding for Ewoks 1K
A Python package for coherent gravitational wave burst analysis 1K
Data pipeline framework for Slurm-managed HPC clusters 1K
Core functions for uToolbox. 1K
Convert scientific image formats (TIFF, MRC, N5) to OME-Zarr 1K
1K
Module for integrated materials simulations. 942
Python package for calculating interfacial water entropy from molecular dynamics... 915
905
Asynchronous Computing Made ESI 859
Set of tools to calculate degradation responses and degradation related paramete... 809
Layered data-flow analysis for HPC I/O. 793
Setup for training Tensorflow models on SLURM clusters. 785
Generating Event Data with Intentional Features for Benchmarking Process Mining 783
Pipeline for ASKAP processing, and profit along the way 734
Dask cluster utilities for HPC environments 671
Phantom generator 658
A Python package for POMDP planning algorithms and environments 576
Tools to build robust and extensible pipelines 555
Create pipelines for preprocessing image data for biodiversity analysis. 549
Generalized Dask Client for GraphViper Framework 495
🌟 [NeurIPS '25 Spotlight] Fair and transparent benchmark of machine learning int... 465
A core project for climate data handling 461
447
XPCS correlation calculations for synchrotron experiments 438
438
Earth Science Notebook Tools for Climate and Weather Model Analysis 410