70 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Accelerated Microstructure Imaging via Convex Optimization (AMICO) from diffusio... | 9K | |
| Automated Quality Control and visual reports for Quality Assessment of structura... | 6K | |
| multi-channel/time-series medical image processing with antspyx | 4K | |
| Preprocessing of diffusion MRI | 3K | |
| Quality Assurance Pipeline for Diffusion MR Data | 3K | |
| pyAFQ: Automated Fiber Quantification ... in Python | 3K | |
| A distribution of a general tool for training and inference of QMRI models | 2K | |
| Post-processing for dMRI derivatives of the Strauss Neuroplasticity Brain Bank (... | 2K | |
| AFQ-Insight: Statistical Learning for Tractometry | 2K | |
| Diffusion parameter EStImation with Gibbs and NoisE Removal pipeline Version 2 | 2K | |
| Open-Source Simulation platform for Deep Brain Stimulation | 2K | |
| Neuro Data MRI to Graphs Pipeline | 1K | |
| This repository contains the code of UtiliziNg tRActography to uncoVEr muLti-fix... | 1K | |
| Automatic White Matter Bundle Segmentation | 1K | |
| Python tools for diffusion tractography visualization | 1K | |
| Scilpy: diffusion MRI tools and utilities | 1K | |
| Processing and analysis pipelines for the PAN Project | 1K | |
| QSM forward model | 1K | |
| Phonetic Analysis ToolKit: Tools for processing phonetic data | 1K | |
| Motion correction algorithms for FLIM data. | 997 | |
| AxSI for MRI data | 934 | |
| Toolkit designed for quantifying and visualising 3D cardiomyocytes orientations ... | 908 | |
| RadTract: enhanced tractometry with radiomics-based imaging biomarkers for impro... | 770 | |
| 689 | ||
| mia_processes | 685 | |
| Config files for my GitHub profile. | 606 | |
| Implementation of regis | 597 | |
| napari plugin for analyzing the redistribution of fluorescence-labeled proteins | 558 | |
| A repo of current preprocessing methods for the Cogan Lab | 393 | |
| MICAFlow MRI processing pipeline | 387 | |
| Minimally preprocessing TheBase dMRI data. | 382 | |
| OSIPI TF2.4: IVIM MRI code collection | 334 | |
| NeuroFlow: A streamlined toolkit for DWI post-processing, offering advanced anal... | 322 | |
| Pipeline for processing MR images and generating parametric maps. | 302 | |
| Open-source eddy-current and head-motion correction for dMRI. | 296 | |
| GPU-accelerated tractography package | 256 | |
| A simple tractography viewer implemented in python. | 254 | |
| Implements functions for the combined analysis of fMRI and dMRI data. | 227 | |
| DoMB Tools: Python toolkit of Department of Molecular Biophysics | 203 | |
| Diffusion Visualization and Explorer (DiVE) | 195 | |
| Tractometry visualization tool built with DIPY and FURY | 188 | |
| Fast Tractography Streamlines Search | 183 | |
| Streamline Density Normalization (SDNorm) | 181 | |
| A command line utility that allows easy modifications on DWI volumes and Dataset... | 179 | |
| The package deals with brain bundles images | 140 | |
| Surface-guided computing of arbitrary 3D surfaces and volumes by bidirectional m... | 140 | |
| FastMF is a python package for microstructural property characterization using d... | 130 | |
| A flexible framework for volume-wise artifact estimation and correction across m... | 129 | |
| Help pre-processing of DTI for use in Sim4Life | 125 | |
| Neurdicom plugins | 116 |
