30 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Deep probabilistic analysis of single-cell and spatial omics data | 77K | |
| Python package to perform enrichment analysis from omics data. | 49K | |
| Spatial Single Cell Analysis in Python | 43K | |
| Python client for the OmniPath web service | 41K | |
| LIANA+: an all-in-one framework for cell-cell communication | 28K | |
| Retentioneering: product analytics, data-driven CJM optimization, marketing anal... | 28K | |
| A Python package for performing pore network modeling of porous media | 21K | |
| CellRank: dynamics from multi-view single-cell data | 9K | |
| rapids-singlecell: GPU-accelerated framework for scRNA analysis | 7K | |
| SpectroChemPy is a framework for processing, analyzing and modeling spectroscopi... | 7K | |
| Multi-omic single-cell optimal transport tools | 2K | |
| rapids-singlecell: GPU-accelerated framework for scRNA analysis | 2K | |
| rapids-singlecell: GPU-accelerated framework for scRNA analysis | 1K | |
| Python package for interactive data visualization | 1K | |
| k-NN-based mapping of cells across representations to transfer labels, embedding... | 1K | |
| A library of utilites for immutable scientific data. | 930 | |
| A GUI for (imaging) mass cyometry analysis predominantly based on the popular St... | 644 | |
| GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial System... | 475 | |
| Automatically annotate cell types, consistently across samples. | 360 | |
| Sparse Linear Multi-Task Regression | 358 | |
| TrajAtlas, a trajectory-centric framework reveals differentiation heterogenity a... | 321 | |
| BEASTsim (BEnchmarking and Analysis of Spatial Transcriptomics simulations) is a... | 287 | |
| ncem. Learning cell communication from spatial graphs of cells. | 253 | |
| Source code and detailed tutorials for "Alignment of Distant Slices of Spatially... | 237 | |
| Analyze how difficult a Spanish word will be to spell | 236 | |
| A Python package for performing pore network modeling of porous media | 155 | |
| TF activity inference, reliability estimation, and perturbation prediction. | 147 | |
| Biologically Guided Variational Inference for Interpretable Multimodal Single-Ce... | 142 | |
| Outhad_Edge is a powerful Python library for user retention analysis. It provide... | 107 | |
| Solver for the generalized omega equation | 52 |
