50 dependents
Package Description Downloads/month
Pydra Dataflow Engine 35K
Pydra tasks for FreeSurfer designed for Clinica 30K
Python classes for representing medical imaging data formats to be used in type ... 23K
Pydra tasks package for fsl 21K
An extension to the fileformats package to handle datascience-related formats 20K
Classes for representing different file formats in Python classes for use in typ... 20K
a Python package for the specification, validation and manipulation of file form... 9K
Abstraction of Repository Centric ANAlysis 5K
Python classes for representing medical imaging data formats to be used in type ... 4K
Frametree: a framework for analysing datasets stored in trees of file objects "i... 3K
MRtrix3 provides a set of tools to perform various advanced diffusion MRI analys... 2K
pydra-tasks-dcm2niix contains Pydra task specifications for the Dcm2niix convert... 2K
Classes for representing different file formats in Python classes for use in typ... 1K
Extension of the frametree package to support XNAT repositories 1K
Pydra2App: a tool for quickly turning Pydra tasks and workflows into containeris... 1K
MRtrix3 provides a set of tools to perform various advanced diffusion MRI analys... 1K
Classes for representing different file formats in Python classes for use in typ... 915
pydra-dcm2niix contains Pydra task specifications for the Dcm2niix converter 646
Extension of the Pydra2App package to support building XNAT Container Service Do... 642
An extension of the Arcana framework to apply workflows and analyses on data sto... 633
An FrameTree extension for interacting with Brain Imaging Structure (BIDS) datas... 527
An Arcana extension for interacting with Brain Imaging Structure (BIDS) datasets... 521
Classes for representing different file formats in Python classes for use in typ... 517
Extensions to add functionality to tool-specific *fileformats* classes 503
Pydra tasks package for FMRIB Software Library (FSL) 495
Pipeline2App: a tool for quickly turning pipelines into containerised applicatio... 495
Scripts for importing workflows written in Nipype to the Pydra dataflow engine s... 492
Dummy classes for testing the 'fileformats' package 443
Collection of tools to derive metrics from physical phantoms used in QA of medic... 405
Classes for representing different file formats in Python classes for use in typ... 333
Pydra interfaces for the Freesurfer commands 316
Classes for representing different file formats in Python classes for use in typ... 314
Pydra tasks package for ANTs 268
Pydra tasks package for ANTs 251
Classes for representing different file formats in Python classes for use in typ... 216
Pydra tasks package for fastsurfer 177
Pydra tasks package for afni 162
Extension of the Pydra2App package to support building XNAT Container Service Do... 160
Classes for representing different file formats in Python classes for use in typ... 145
Extensions to add functionality to tool-specific *fileformats* classes 144
Pydra tasks package for niworkflows 131
Extensions to add functionality to tool-specific *fileformats* classes 108
Pydra tasks package for nireports 100
Pydra tasks package for AFNI 100
Pydra tasks package for fastsurfer 73
Pydra tasks package for mriqc 72
Classes for representing different file formats in Python classes for use in typ... 69
Classes for representing different file formats in Python classes for use in typ... 68
Pydra interfaces for the Freesurfer commands 66
Extensions to add functionality to tool-specific *fileformats* classes 64