109 dependents
| Package | Description | Downloads/month |
|---|---|---|
| PSyKE: a (Python) platform for symbolic knowledge extraction | 28K | |
| Command line utility for forced alignment using Kaldi | 15K | |
| Divisive Intelligent K-Means algorithm (DiviK) for joint feature selection and c... | 15K | |
| Co-activation Patterns (CAPs) Python package | 6K | |
| 이광호 강사 파이썬 유틸리티 | 4K | |
| API to read, write, and filter DNA sequence alignment files | 3K | |
| A simple tool to calculate metrics from a BAM file and filter references with un... | 3K | |
| Cell Cycle Mapping Package | 3K | |
| A small package for data processing | 3K | |
| Popari: a probabilistic graphical model for integrated spatial transcriptomics a... | 3K | |
| TBD | 3K | |
| Computing Protein Electric Field Topology in python, built for high-throughput a... | 2K | |
| A software tool that allows graph theory analysis of nano-structures. | 2K | |
| Python implementation of Consensus Clustering by Monti et al. (2003) | 2K | |
| 2K | ||
| A package for definining the domain of a machine learning model via a feature di... | 2K | |
| Functions to analyze atmospheric aerosol data | 2K | |
| Image processing pipeline to automatically crop and quantify in vivo bioluminesc... | 2K | |
| STACCI for STCase | 2K | |
| Python Package for the Analysis of Paleoclimate Data. Documentation at | 1K | |
| Python library that classifies content from scientific papers with the topics of... | 1K | |
| tubesML, a package that allows for flexible ML pipelines, model validation, and ... | 1K | |
| Image dataset analyzer using image embedding models and clustering methods. | 1K | |
| Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal | 977 | |
| Causal graph extraction from continuous tabular data | 968 | |
| Light Weight Homology Framework | 967 | |
| Python package to detect and analyse collective phenomena | 924 | |
| Particle swarm optimizer | 915 | |
| xiFDR: A tool for FDR analysis in cross-linking mass spectrometry | 891 | |
| A Python package for explainable cluster analysis | 853 | |
| scCAMEL: single cell Cross- Annotation and Multimodal Estimation on Lineage traj... | 852 | |
| Machine learning fitting for Electron Energy Loss Spectroscopy | 811 | |
| Graph-based Contrastive Learning enable Fast Single-Cell Embedding | 804 | |
| Multi-scale feature analysis of spatial transcriptomics | 747 | |
| A toolkit for subcellular analysis of spatial transcriptomics data | 741 | |
| Multi-scale feature analysis of spatial transcriptomics | 656 | |
| OmicScope: from quantitative proteomics to systems biology visualization | 636 | |
| Data/Pattern Mining Algorithms for Financial Data | 616 | |
| RNA-seq Analysis Pipeline Testing and Optimization Resource - Intelligent pipeli... | 605 | |
| An extension of the ip2geotools package that refines the estimation of the loca... | 535 | |
| A Python package of cooperative co-evolutionary algorithms for feature selection... | 523 | |
| SpaGFT: Graph Fourier transform for spatial omics representation and analyses of... | 516 | |
| A package for spatial lipidomics data analysis including preprocessing, embeddin... | 501 | |
| Spatiotemporal modeling of spatial transcriptomics | 488 | |
| syftr is an agent optimizer that helps you find the best agentic workflows for y... | 473 | |
| Active Learning Molecular Selection | 458 | |
| some default | 454 | |
| Surrogate Assisted Feature Extraction | 436 | |
| Arkalos is an easy-to-use Python framework for data analysis, building data apps... | 431 | |
| pose estimation / ML model wrapper and annotation utility | 427 |
