56 dependents
Package Description Downloads/month
Operations on SSSOM mapping tables 68K
Ontology Access Kit: Python library for common ontology operations over a variet... 52K
SSSOM is a Simple Standard for Sharing Ontology Mappings. 39K
The Biolink Model is a high-level data model designed to standardize types and r... 26K
a framework for specifying and executing mappings between data models 21K
kgx
A Python library and set of command line utilities for exchanging Knowledge Grap... 17K
Structure your data in a FAIR way using google sheets or TSVs. These are then co... 10K
Data transformation framework for LinkML data models 9K
Extension of LinkML runtime for converting instances of LinkML classes to OWL (c... 9K
National Microbiome Data Collaborative (NMDC) unified data model 8K
Validating external terms 8K
Python package for interacting with Monarch Initiative knowledge graph 7K
Unified Python client for Alliance of Genome Resources (AGR) curation APIs 6K
Automated assistance for the schema development lifecycle 4K
OntoGPT is a Python package for extracting structured information from text with... 3K
Automate building energy simulation implementation in Modelica 3K
Cell Annotation Schema Tools 3K
A framework for handling metadata based on ETL, CQRS, and event sourcing. 2K
Runtime system for NMDC data management and orchestration 2K
A simple service to store and retrieve schema-conform data records 2K
2K
Tool for data modelling in Gen3 2K
babelon 1K
Add your description here 1K
Python package that aids the processes of curating, publishing, and sharing rese... 800
AI Atlas Nexus provides tooling to help bring together disparate resources relat... 794
dcm: nicegui based visualization of dynamic competence map 786
Add your description here 755
A registry of information resources used in NCATS Data Translator 743
Root ontology in LinkML for ontology-typed knowledge graphs with write-time vali... 605
This is the project description. 586
493
Tooling for PCR primer scheme definitions 474
mCodeGPT 448
Infer models, enrich with meaning for terms including enum permissible values 414
379
Check whether an instance of a LinkML class has used all of the associated class... 376
Lightweight pydantic wrapper prompting library to support sharing of oncology-re... 372
RareLink - A REDCap-based framework linking international registries to FHIR and... 288
Risk Atlas Nexus provides tooling to help bring together disparate resources rel... 240
Multi-domain military operations schema: MIM operational concepts, DISARM influe... 228
Codegen Python GraphQL Entity Framework 221
GHGA Validator - A Python library and command line utility to validate metadata 196
Brain Knowledge Interaction Toolkit 195
Translates LinkML schemas into Datalog programs and executes them using Souffle,... 182
A simple package that supports data catalogging for small organizations and proj... 158
A LinkML model for the MIxS standard 147
LinkML generator for Scala 3 case classes and traits 142
Generate, export and use RDF schemas. 141
Convert SAS datasets to Dataset-JSON v1.1 format 125