278 dependents
| Package | Description | Downloads/month |
|---|---|---|
| napari: a fast, interactive, multi-dimensional image viewer for python | 137K | |
| Spectral analysis, simulation and subtomogram averaging of heterogenic cylindric... | 22K | |
| Tool for segmentation in bioimaging | 17K | |
| Generate multifunctional and macro recordable GUIs from Python classes | 6K | |
| Automated 3D cell detection in very large images | 6K | |
| An infinitely extensible and reusable application framework for data science. | 5K | |
| A base napari plotter widget for interactive plotting | 5K | |
| Axon/Myelin segmentation using Deep Learning | 4K | |
| A pocket calculator like interface to image processing in napari | 4K | |
| napari plugin for ROI tracking and FRAP analysis in time-lapse images | 4K | |
| FenestRA: A Napari plugin for LSEC AFM Super-Resolution & Fenestration Analysis. | 3K | |
| Automated 3D brain registration with support for multiple species and atlases. | 3K | |
| Add your description here | 3K | |
| A plugin to read, write, and manage image data in napari | 3K | |
| GPU-accelerated image processing in napari using OpenCL | 2K | |
| A plugin to navigate a .nd2 file (confocal movie) and annotate nuclei using elli... | 2K | |
| An application for interactive for tracking with motile | 2K | |
| Settings with widget for the ndev-kit | 2K | |
| A 3D interactivity toolbox for napari | 2K | |
| Single molecule tracking in plugin for Napari | 2K | |
| An interactive classifier plugin to use with label images and feature measuremen... | 2K | |
| Automatic micro-tubules cut detector. | 2K | |
| A minimal dependency napari plugin giving access to scikit-image functions | 2K | |
| Quickly find the affine matrix mapping one image to another using manual corresp... | 2K | |
| A plugin for segmentation by pixel classification using pre-trained neural netwo... | 2K | |
| Large-scale multi-hypotheses cell tracking | 2K | |
| A napari plugin for clustering objects according to their properties. | 2K | |
| napari widgets for start-to-finish batch processing | 2K | |
| YoloV8 model for the detection of Tau fibrils in EM images. | 1K | |
| Single-cell spatial omics analysis that makes you happy! | 1K | |
| A plugin for batch processing of confocal and whole-slide microscopy images of b... | 1K | |
| A new layer for bounding boxes in 2+ dimensions. Fork of napari-bbox for spfluo-... | 1K | |
| A napari plugin for manual cell tracking curation | 1K | |
| Python tool for visualising and interacting with cryo-ET and subtomogram averagi... | 1K | |
| A plugin for collaborative annotation in cryoET using copick | 1K | |
| Napari plugin to manually correct epithelia segmentation in movies | 1K | |
| Omega: an autonomous LLM-powered agent for conversational image processing and a... | 1K | |
| Python Image Displacement Identification | 1K | |
| Irregular cell shape segmentation using VollSeg | 1K | |
| Napari plugin for DPR Resolution Enhancement | 1K | |
| A plugin to process hyperspectral images of sediments | 1K | |
| Efficient cell detection in large images using cellfinder in napari | 1K | |
| DMC-BrainMap is an end-to-end tool for multi-feature brain mapping across specie... | 1K | |
| A plugin that enables 3D image segmentation provided by Allen Institute for Cell... | 1K | |
| A plugin to use spfluo within napari | 1K | |
| A table data viewer for Python | 964 | |
| Paint segmentations directly to on-disk/remote zarr arrays | 946 | |
| The plugin employed to annotate volumes employed in the ToothFairy Challenges | 927 | |
| A simple plugin to use models developped for flowering, fruitlet and fruit | 924 | |
| Coppafish, Antibody Staining, and Two-photon alignment: 3D alignment framework f... | 893 |
