32 dependents
Package Description Downloads/month
Add your description here 21K
Tool for segmentation in bioimaging 18K
An open-source application for biological image analysis 11K
An open-source application for biological image analysis 8K
spaCR Spatial phenotype analysis of CRISPR–Cas9 screens (spaCR) 5K
Morphological features from images and masks made easy. 5K
A python package and graphical user interface to perform single-cell analysis fo... 4K
numerics toolbox for imaging deformability cytometry 3K
label matrix coloring algorithm 2K
An image processing framework created for Ex-FAB NSF BioFoundry that aims to str... 2K
Omnipose: a high-precision solution for morphology-independent cell segmentation 2K
Spatial phenotype analysis of crisp screens (SpaCr) 1K
Medical Image Visualization Tool 🐍🚀🎉🦕 890
scPortrait is a scalable toolkit to generate single-cell representations from ra... 872
DNAsight 641
A collection of custom fractal tasks. 569
Python version of Costanza 488
Plant mesh phenotyping using python 480
Python librairy to process AITA data 419
Comprehensive package for analysis of Optical Pooled Screens (OPS) for biologica... 390
Common utilities for image processing, segmentation, and detection 273
Millimeter-wave galaxy cluster and source detection package 252
Single-cell fluorescence microscopy data analysis 207
Scripts for image features calculation. 154
python library developed for use with OpenFCST 131
live-cell image analysis 125
Image processing made easy 124
Omnipose: a high-precision solution for morphology-independent cell segmentation 119
Python Implementation of the CoLlAGe radiomics descriptor. CoLlAGe captures subt... 115
Streamline your data science setup with dsbundle in one effortless install. 85
Redbot ML module for image processing and anomaly detection 83
An image processing framework created for Ex-FAB NSF BioFoundry that aims to str... 4