43 dependents
| Package | Description | Downloads/month |
|---|---|---|
| napari: a fast, interactive, multi-dimensional image viewer for python | 137K | |
| Attaches a customizable Tools menu to napari | 5K | |
| A pocket calculator like interface to image processing in napari | 4K | |
| A plugin based on scikit-image for segmenting nuclei and cells based on fluoresc... | 3K | |
| A meta plugin for processing timelapse data timepoint by timepoint in napari | 3K | |
| Segmentation of anatomical structures in a common coordinate space | 2K | |
| Track analysis using TrackMate xml and csv generated tracks using NapaTrackMater... | 2K | |
| GPU-accelerated image processing in napari using OpenCL | 2K | |
| Minimal app for big fish. | 2K | |
| A classification plugin for the ROIs of a segmentation mask. If you face problem... | 2K | |
| GPU-accelerated, OpenCL-based Random Forest Classifiers for pixel and labeled ob... | 2K | |
| A napari plugin for manual cell tracking curation | 1K | |
| Process images using SimpleITK in napari | 1K | |
| A napari plugin to load & deskew folders of lattice light sheet TIFFs | 1K | |
| Efficient cell detection in large images using cellfinder in napari | 1K | |
| A plugin that enables 3D image segmentation provided by Allen Institute for Cell... | 1K | |
| 1d plotting in napari-based canvas. | 1K | |
| Panoptic segmentation algorithms for 2D and 3D electron microscopy in napari | 785 | |
| napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation t... | 727 | |
| A demo plugin to load, segment and save tracking challenge data. | 644 | |
| A GUI for (imaging) mass cyometry analysis predominantly based on the popular St... | 644 | |
| Crop regions in napari manually | 619 | |
| A napari plugin for itk-elastix | 535 | |
| A verison of isosegdenoise with strictly defined dependencies for more stable in... | 511 | |
| File IO with itk for napari | 466 | |
| Multi-atlas whole-brain microscopy registration | 425 | |
| A plugin that enables annotations provided by Allen Institute for Cell Science | 410 | |
| Napari plugin for viewing Brain Image Library datasets | 403 | |
| Mother machine image analysis through napari | 336 | |
| A plugin that enables organelle segmentation, forked from tools from Allen Insti... | 331 | |
| finn is (not) napari | 277 | |
| Linking and tracks analysis | 270 | |
| Nanobiosensorics microscopic napari plugin. | 242 | |
| The napari adaptation of the ImageJ/Fiji plugin AnnotatorJ for easy image annota... | 234 | |
| Browse folders of images and open them using double-click | 221 | |
| Human in the loop 2d cell migration analysis | 219 | |
| A simple plugin to view APR images in napari | 204 | |
| A simple plugin for testing purposes | 156 | |
| A simple plugin to create a lot of training data from a 3D volume and mask | 140 | |
| Preview lightsheet microscopes acquisition, and allow the creation of an XML for... | 99 | |
| An annotator tool collection by the BIOMAG group. | 66 | |
| Plugin napari permettant segmentation DIC + masque Brillouin | 66 | |
| A napari plugin for counting cells. | 7 |
