685 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Workflows and interfaces for neuroimaging packages | 483K | |
| Modern Nipype Workflow Management based on Lyman | 313K | |
| Machine learning for NeuroImaging in Python | 290K | |
| package for converting dicom files to nifti | 129K | |
| Python tools for querying and manipulating BIDS datasets. | 127K | |
| nnU-Net is a framework for out-of-the box image segmentation. | 87K | |
| DIPY is the paragon 3D/4D+ medical imaging library in Python. Contains generic m... | 81K | |
| Medical imaging processing for AI applications. | 81K | |
| Python implementation of the TRX file format | 65K | |
| Tool for robust segmentation of >100 important anatomical structures in CT and M... | 54K | |
| Python suite for neuroscience research across all modalities. | 32K | |
| a standalone fork of nipy/nibabel#656 | 28K | |
| Common workflows for MRI (anatomical, functional, diffusion, etc) | 27K | |
| A Python package to analyze neuroimaging data | 25K | |
| MedVAE is a family of six medical image autoencoders that can encode high-dimens... | 25K | |
| Training foundational medical imaging models using multi-task learning. | 25K | |
| Forschungszentrum Jülich Neuroimaging Feature Extractor | 19K | |
| The NiPreps' Reporting and Visualization system - report templates and "reportle... | 17K | |
| FSL Python library | 17K | |
| Coordinate- and image-based meta-analysis in Python | 15K | |
| RedBrick platform Python SDK! | 14K | |
| MEG/EEG analysis tools | 14K | |
| This package creates a management system to run the ASTEC algorithms for develop... | 13K | |
| Useful tools from the Network Neuroscience Lab | 13K | |
| Shared general purpose tools for the BrainGlobe project | 13K | |
| A library for interacting with the Datamint API, designed for efficient data man... | 11K | |
| TE-dependent analysis of multi-echo fMRI | 10K | |
| Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREP... | 10K | |
| Neuroimaging in Python FMRI analysis package | 10K | |
| A Python implementation of the moving average principal components analysis meth... | 9K | |
| MAGDI data | 8K | |
| Conversion of neuroimaging data for display in Neuroglancer | 8K | |
| Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes | 7K | |
| BrainSpace is an open-access toolbox that allows for the identification and anal... | 7K | |
| Neural networks toolbox focused on medical image analysis | 7K | |
| Repository on the collaborative IVADO medical imaging project between the Mila a... | 7K | |
| fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI ... | 7K | |
| Unsupervised Learning for Image Registration | 7K | |
| Read/write medical image data | 7K | |
| A fast, minimal viewer for multi-dimensional arrays | 7K | |
| Python package and documentation for MR-zero | 7K | |
| Toolbox for Differential Geometry on Triangle and Tetrahedra Meshes (FEM, Laplac... | 6K | |
| Co-activation Patterns (CAPs) Python package | 6K | |
| Software interfaces for interacting with brain atlases - Python client | 6K | |
| Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord... | 6K | |
| generic framework to develop protocols, with an initial focus medical imaging ac... | 6K | |
| FSLeyes, the FSL image viewer | 6K | |
| A python library for neuroimaging transformations | 6K | |
| An AI-inference engine for 3D clinical and preclinical whole-body segmentation t... | 6K | |
| Automated Quality Control and visual reports for Quality Assessment of structura... | 6K |
