151 dependents
Package Description Downloads/month
Common workflows for MRI (anatomical, functional, diffusion, etc) 27K
A Python package to analyze neuroimaging data 25K
MedVAE is a family of six medical image autoencoders that can encode high-dimens... 25K
Forschungszentrum Jülich Neuroimaging Feature Extractor 19K
The NiPreps' Reporting and Visualization system - report templates and "reportle... 17K
Coordinate- and image-based meta-analysis in Python 15K
Useful tools from the Network Neuroscience Lab 13K
TE-dependent analysis of multi-echo fMRI 10K
A Python implementation of the moving average principal components analysis meth... 9K
Co-activation Patterns (CAPs) Python package 6K
Software interfaces for interacting with brain atlases - Python client 6K
Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord... 6K
Automated Quality Control and visual reports for Quality Assessment of structura... 6K
PLSC for MNE 5K
A toolkit for post hoc BIDS-ification of unstructured NIfTI datasets. 4K
Process Near-Infrared Spectroscopy Data in MNE 4K
rapidtide - a suite of programs for doing time lag correlation analysis on fMRI ... 4K
Modeling and Statistical analysis of fMRI data in Python 4K
A toolbox for comparing brain maps 3K
Preprocessing of diffusion MRI 3K
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A statistics and context decoding toolbox for neuroimaging. 3K
Package to view Nifti in BIDS directory 3K
Pipeline for anatomic processing for macaque 3K
A tool for ingressing outputs from other processing pipelines (e.g., HCP, UKB) f... 2K
Software platform for clinical neuroimaging studies 2K
Package allowing users to run Activation Likelihood Estimation Meta-Analysis 2K
Plotting utilities for neuroscience: styles, palettes, surfaces, glass-brain, an... 2K
Blind sparse hemodynamic deconvolution methods for fMRI data 2K
Neuro Data MRI to Graphs Pipeline 1K
A Python based soft to launch neuroimaging containers on clusters 1K
Analysis toolbox for MRSI data 1K
Scilpy: diffusion MRI tools and utilities 1K
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FALCON is a Python-based software application designed to facilitate PET motio... 1K
Application for ROI fMRI data analysis. 1K
Processing and analysis pipelines for the PAN Project 1K
Python library for physiological signals analysis (IBI & HRV, ECG, BVP, EDA, RES... 1K
Converting real-time EEG into sounds, music and visual effects 1K
QSM forward model 1K
A toolbox for viewing, manipulating, and additional actions on HippUnfold output... 1K
Framework for the reproducible processing of neuroimaging data with deep learnin... 996
A Specialized Package for Extracting Image Features for Cardiac Amyloidosis Quan... 937
First level analysis for WUSTL Ocean labs 932
Extract regional statistics from scalar brain maps using atlas-based parcellatio... 924
A toolkit for post hoc BIDS-ification of unstructured NIfTI datasets. 917
BetaSeries Correlations implemented in Nipype 916
Gaussian Linear Hidden Markov Model 913
HRFunc is a python preprocessing and modeling tool for estimating neural activit... 842
Creates chord diagrams for connectivity/graph data 812