69 dependents
Package Description Downloads/month
Modern Nipype Workflow Management based on Lyman 313K
Common workflows for MRI (anatomical, functional, diffusion, etc) 27K
Tools for importing nipype1 interfaces into Pydra 20K
The NiPreps' Reporting and Visualization system - report templates and "reportle... 17K
Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREP... 10K
Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes 7K
fMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse fMRI ... 7K
Automated Quality Control and visual reports for Quality Assessment of structura... 6K
Heuristic DICOM Converter 3K
Preprocessing of diffusion MRI 3K
3K
Pipeline for anatomic processing for macaque 3K
A tool for ingressing outputs from other processing pipelines (e.g., HCP, UKB) f... 2K
Software platform for clinical neuroimaging studies 2K
Post-processing for dMRI derivatives of the Strauss Neuroplasticity Brain Bank (... 2K
Processing workflows for magnetic resonance images of the brain in infants 1K
Application for ROI fMRI data analysis. 1K
Processing and analysis pipelines for the PAN Project 1K
First level analysis for WUSTL Ocean labs 932
BetaSeries Correlations implemented in Nipype 916
Multiparametric Image Analysis 775
fMRI preprocessing pipeline and analysis tools adapted for rodent images. Visit ... 764
Bootstrapped Analysis of Stable Clusters- A semi-automated fMRI individual and g... 716
Mindstorm: Advanced analysis of neuroimaging data 686
mia_processes 685
Standardized Workflow for Advanced Neuroimaging in Epilepsy 616
A Flywheel Gear for implementing Chris Rorden's dcm2niix for converting DICOM (o... 568
Multiband Artifact Regression in Simultaneous Slices (MARSS) 562
Scripts for importing workflows written in Nipype to the Pydra dataflow engine s... 492
Python tools for FreeSurfer visualization and QA. 477
Graph analysis for neuropycon (using nipype, and ephypype); based on previous pa... 442
PETPrep: A Robust Preprocessing Pipeline for PET Data 440
Utility functions to write LivingPark notebooks. 398
MICAFlow MRI processing pipeline 387
processing scripts for MRS data at CUBRIC 386
Minimally preprocessing TheBase dMRI data. 382
Python package providing pipelines for electrophysiological (EEG/MEG) data withi... 358
NeuroFlow: A streamlined toolkit for DWI post-processing, offering advanced anal... 322
PETPrep head motion correction workflow 319
Modelling the data and not the images in FMRI 316
NiPype-1 workflow serializer. 309
Open-source eddy-current and head-motion correction for dMRI. 296
Data pipelines and analysis library for functional MRI 284
A base project for research management. 268
Qt application to transform raw tables into clean geographic data. 264
A toolbox for analysing neuro-oncology MRI 237
A reusable Django app to manage MRI data. 230
218
A composite, open-source Python library for processing human and preclinical ASL... 218
Nipype workflow to generate fieldmaps from EPI acquisitions with differing phase... 203