16 dependents
Package Description Downloads/month
Spatial Single Cell Analysis in Python 43K
The core library of the Napitsu project supporting the creation, transformation,... 4K
Network-Oriented Repurposing of Drugs Python Package 2K
TFit : Assessing the combinatorial potential of Transcription Factors in Gene Re... 1K
Kinase-substrate network prediction: PostgreSQL, Numba, pynetphorest, live data,... 1K
Awesome Benchmark of Gene Regulatory Networks 1K
Analyze cellular niches in single-cell spatial transcriptomics data 946
End-to-end analysis of spatial multi-omics data 723
Single-cell data preprocessing for multiple samples. 651
A GUI for (imaging) mass cyometry analysis predominantly based on the popular St... 644
Python package for inference of the gene regulatory network and the boolean netw... 560
GraphCompass: Graph Comparison Tools for Differential Analyses in Spatial System... 475
This page hosts NeKo, a python package that allow the user to automatically buil... 427
NetworkCommons is a community-driven platform designed to simplify access to too... 196
Graph-based Reconstruction of Artificial Intercellular Links for Cardiac Spatial... 98
A modernised Python 3 port of the original NetworKIN 3.0 tool (Linding, Jensen, ... 56