19 dependents
Package Description Downloads/month
Python modules to work with large multiresolution images. 195K
PyTorch-based framework that handles segmentation/regression/classification usin... 94K
Computational Pathology Toolbox developed by TIA Centre, University of Warwick. 32K
🔬 Python SDK providing access to the Aignostics Platform. Includes Aignostics La... 15K
Portable and blazingly fast whole slide image compression and serialization libr... 4K
Efficient data structures and IO for whole slide image analysis 3K
Add your description here 3K
Integrating transcriptional data to decipher the tumor microenvironment with the... 2K
Semi-automatic neuropathology analysis package for quantifying IHC WSI's 1K
Package supports all bio-imaging functionality provided by TileDB 785
Histomic Atlases of Variation Of Cancers (HAVOC) is a versatile tool that helps ... 495
A lightweight, extensible toolkit for preprocessing and analyzing whole slide im... 485
Read/write functions to and from spatialdata for Deep Visual Proteomics 360
A histopathology toolkit for working with whole slide images and their annotatio... 346
Read and process histological slide images with python! 339
Histomic Atlases of Variation Of Cancers (HAVOC) is a versatile tool that helps ... 205
Lab for quantitative bioimage analysis experiments in Python 175
CORE is a coarse-to-fine framework for nuclei-level registration of multimodal w... 154
A package for preprocessing whole-slide images. 50