14 dependents
| Package | Description | Downloads/month |
|---|---|---|
| COBRApy is a package for constraint-based modeling of metabolic networks. | 62K | |
| hopsy - Highly Optimized Polytope Sampling in Python | 7K | |
| A python package for rounding polytopes. | 4K | |
| Microbial community modeling based on cobrapy. | 4K | |
| Repository for metworkpy, a python package for creating and working with network... | 1K | |
| Simulate metabolic flux distributions, gene knockouts, and dynamic modeling for ... | 763 | |
| FBC reference files for SBML model curation. | 431 | |
| Module for enumerating minimal cut sets | 374 | |
| Framework to optimize metabolic models using evolutionary computation. | 317 | |
| OptSlope - A tool for metabolic engineering, based on the OptSlope algorithm | 221 | |
| mineapy, Minimum network enrichment analysis in Python | 199 | |
| This is a package for visualizing and analyzing multiple metabolic models. It al... | 142 | |
| Python implementation of iMAT algorithm for integration of gene expression data ... | 133 | |
| `py_cFBA` is a Python toolbox designed for constraint-based flux balance analysi... | 79 |
