14 dependents
| Package | Description | Downloads/month |
|---|---|---|
| trajectory inference | 4K | |
| A python library for multi omics included bulk, single cell and spatial RNA-seq ... | 2K | |
| MIOFlow is a Python package for modeling and analyzing single-cell RNA-seq data ... | 603 | |
| Unified dimensionality reduction and neural network analysis framework | 477 | |
| Feature Clock: High-Dimensional Effects in Two-Dimensional Plots | 306 | |
| Multislice PHATE for tensor embeddings | 278 | |
| A small package of utilities for analysis of cytometry data in Python | 235 | |
| Manifold-aware semantic and relational affinity metrics using PHATE | 213 | |
| Data centric algorithm agnostic cytometry analysis framework | 131 | |
| Multilingual semantic embedding visualization and analysis toolkit | 123 | |
| Presto: Projected Embedding Similarty based on Topological Overlays | 116 | |
| Single-cell explain etc etc | 114 | |
| Learning meaningful representations of genes | 84 | |
| GUI to generate, cluster and optimize dimensionality reduction output | 71 |
