29 dependents
Package Description Downloads/month
Distributed image processing 316K
Pure Python library for reading NIS Elements ND2 images and metadata 8K
Utilities for scaling geospatial analyses 5K
Neurotorch is a tool designed to extract regions of synaptic activity in neurons... 2K
This repository contains utility functions and interfaces that can be used to in... 2K
A Python wrapper for 18 image quality indicators. 1K
Numerical IMage Analyses. 1K
Analysis pipeline for rodent widefield calcium imaging data. 1K
This repository contains utility functions and interfaces that can be used to in... 946
Tools to process widefield data 699
my personal library 649
A GUI for (imaging) mass cyometry analysis predominantly based on the popular St... 644
A package containing utility scripts for use with KSO analysis notebooks. 463
A napari plugin for live video recording with a generic camera device. 455
A napari plugin for segmentation using vision transformer features 448
A program for counting CFUs in petri dishes 270
A Python package for processing and analyzing single-particle tracking (SPT) dat... 264
Collection of scripts and wrappers around trackpy. 210
Software for analysing the data generated with the nanoQNT device. It includes a... 186
a toolset to analyze videos of foraging animals. 185
Software for performing resonant inelastic xray scattering analysis at NSLS-II 158
Generated from aind-library-template 135
A python program to automatically detect fish sounds in passive acoustic recordi... 134
A graphical user interface (GUI) for PIMS 129
Radial Image Analysis Toolkit 111
High-level interface for analyzing single-molecule FRET data 107
dlc tracking modules 99
A tool for reading ND2 files produced by NIS Elements 98
looming experiment analysis 69