46 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Terminal plasmid map viewer and editor | 15K | |
| A tool to design primers that target specific variants in genomic sequences. Ali... | 5K | |
| The backend application for OpenCloning | 5K | |
| Foli-seq data processing and analysis tools | 4K | |
| Custom python package for selection, design, and initiator addition for HCR prob... | 2K | |
| a collection of python scripts and functions for exploratory analysis of bioinfo... | 2K | |
| A package to design primers in Anopheles gambiae whilst considering genetic vari... | 2K | |
| Exact Python reproduction of the NEB Tm Calculator for PCR primer analysis with ... | 1K | |
| Primer Design in Anopheles gambiae and funestus considering genetic variation | 1K | |
| a toolbox for utilize organelle genomic data | 1K | |
| Web server for U-Probe | 1K | |
| In silico PCR tool | 934 | |
| Variable VirusAMPlicons (varVAMP) is a tool to design primers for highly diverse... | 901 | |
| SMAP is a software package that analyzes next-generation DNA sequencing read map... | 772 | |
| Showcase for bioinformatics tools | 711 | |
| Feature extraction and analysis toolkit for antisense oligonucleotide design. | 706 | |
| A easy-to-use Python API for Primer3 primer design. | 663 | |
| This is used for automatically designing gRNAs for genome editing by Target-AID. | 642 | |
| Amplicon design tool for TB drug resistance | 625 | |
| A user friendly package for designing parts for multiple gene deletions in Candi... | 581 | |
| Biochemistry & molecular biology helper tools | 565 | |
| Automatically design multiplex PCR primer pairs for diverse templates | 563 | |
| a toolbox for utilize organelle genomic data | 544 | |
| just another DNA manipulator in python | 538 | |
| A professional FastMCP server for in silico molecular biology, specializing in q... | 487 | |
| a tool for designing primer panels for multiplex PCR. | 487 | |
| Exact pairwise and 3D sequence alignment utilities | 464 | |
| SIREN: Suite for Intelligent RNAi design and Evaluation of Nucleotide sequences | 403 | |
| Primalscheme3. Generation of highly multiplex primerschemes | 395 | |
| Light and fast Python pipeline for searching species-specific regions in bacteri... | 358 | |
| 300 | ||
| A lightweight kmer-based algorithm for designing diagnostic CRISPR assays using ... | 286 | |
| helpful tools for working with nucleic acids | 286 | |
| Primer Design through Submodular Function Estimation | 280 | |
| docking is all you need... | 204 | |
| primer design for haplotype genotyping using indel information | 170 | |
| Oligopool Calculator - Automated design and analysis of oligo pool libraries | 165 | |
| A modular genomic toolkit focused on automated primer design, sequence validatio... | 134 | |
| Pipeline for primer design | 107 | |
| Detecting dimers among multiple oligo sequences | 99 | |
| Python package for genome-scale design of oligo probes for DNA/RNA FISH. | 91 | |
| A comprehensive KASP primer design tool for SNP analysis and primer design | 87 | |
| Automated indel-based primer design for QTL fine mapping | 86 | |
| 81 | ||
| An automated primer design pipeline for conserved regions with specificity valid... | 74 | |
| A pipeline for searching species specific primer sets at genome level | 66 |
