14 dependents
Package Description Downloads/month
The Process Bi-Graph Extensible Simulation Toolkit is a Python-based tool for cr... 4K
A visualization method for displaying the structure of process bigraphs 3K
Core implementations of process-bigraph.composite.Process aligning with BioSimul... 2K
Create, execute, and introspect reproducible composite simulations of dynamic bi... 2K
Whole Cell E. coli Model 2K
The Process Bi-Graph Extensible Simulation Toolkit is a Python-based tool for cr... 1K
multi-cell simulations with pymunk 2d physics 853
Process-bigraph wrapper for Mem3DG membrane mechanics simulator 323
Core implementations of process-bigraph.composite.Process aligning with BioSimul... 295
server for hosting processes and composites from process-bigraph 279
237
154
Community Dynamic Flux Balance Analysis using process-bigraph 132
Vivarium 2.0 simulation interfaces 2