20 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Ontology Access Kit: Python library for common ontology operations over a variet... | 52K | |
| Utilities for building standardized command-line interfaces for biosimulation so... | 9K | |
| pymetadata are python utilities for working with metadata. | 6K | |
| Exposing public genomics data via computable and searchable metadata | 2K | |
| An example package | 2K | |
| A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation. | 925 | |
| Tools for accessing CHADO databases. | 782 | |
| ARG normalization by mapping to the ARO ontology. | 638 | |
| Django app to parse/load phenotype ontologies (OncoTree, HPO, MONDO, etc) | 588 | |
| Access public biological ontologies. | 401 | |
| Convert GFF, fastas, annotation table and species name into Genbank. | 387 | |
| nmrml2isa - nmrML to ISA-Tab parsing tool | 385 | |
| PSI-MOD validation and curation tools for quality control and data management | 327 | |
| Utility package to find gene - drug relationships within CARD | 238 | |
| 237 | ||
| The python implementation to mzqc | 230 | |
| PhenoQC is a lightweight, efficient, and user-friendly toolkit designed to perfo... | 174 | |
| Del2Phen, a tool to predict phenotypes associated with copy-number variants base... | 135 | |
| Converting peptidoforms to residue SMILES using the PSI-MOD CV | 121 | |
| Ontology for whole-cell modeling | 70 |
