28 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Analysis tools for single-cell metabolome data. | 15K | |
| PyProphet: Semi-supervised learning and scoring of OpenSWATH results. | 8K | |
| A library for QC report based on MultiQC framework | 3K | |
| EasyPQP: Simple library generation for OpenSWATH | 2K | |
| A python library with scripts and helpers classes for quantms workflow | 2K | |
| quantms and ms2rescore helper functions and scripts | 1K | |
| SUPPRESSING SIGNAL ARTIFACTS IN CE-SICRIT-MS VIA OSCILLATION PROCESSING | 1K | |
| IO related functionalities for oktoberfest. | 852 | |
| MicrobeRX | 807 | |
| Python tools for proteogenomics analysis toolkit | 796 | |
| Python toolkit for LC-MS/MS Proteomics analysis based on MuData | 658 | |
| A visualization and data exploration platform for Data-Independent Acquisition m... | 642 | |
| Integrated library to perform feature normalization and multiple abundance compu... | 465 | |
| Breath analysis in python | 347 | |
| Streamlined automated data analysis. | 302 | |
| A package for creating data acquisition methods for mass spectrometers | 296 | |
| Towards automating Kendrick mass plots | 286 | |
| FragPipe-SpecLib: Simple library generation for FragPipe | 239 | |
| Quantitative proteomics data toolkit — convert, transform, query, and validate Q... | 198 | |
| percolator base rescoring investigations of protein-nucleic acid crosslinking pr... | 181 | |
| GlycoTrans: Transformer models (GlycoBERT & GlycoBART) for predicting glycan str... | 174 | |
| Absolute quantification package based on quantms.io | 154 | |
| glyxtoolms - python tools for glycopeptide analysis with OpenMS | 152 | |
| onsite: posttranslation modification site localization | 145 | |
| A partial python import of the R package rtms https://cran.r-project.org/web/pac... | 108 | |
| DeepHalo: A deep learning-integrated workflow for high-throughput discovery of h... | 103 | |
| Convert multiple files into quantms.io format | 102 | |
| Mass spectrometry data analysis package | 102 |
