13 dependents
Package Description Downloads/month
single cell foundation model for Gene network inference and more 1K
cz-benchmarks is a package for standardized evaluation and comparison of machine... 1K
Graph-based age dependency analysis on scVI latent space with Moran's I, ADI, dC... 593
scPRINT-2 is a Large Cell Model for Gene Network Inference, Denoising and more f... 463
Cell DISentangled Experts for Covariate counTerfactuals (CellDISECT). Causal gen... 452
Panpipes - multimodal single cell pipelines 396
Run embedding comparisons for single-cell data 369
DeepTAN: A multi-task framework designed to infer multi-omics trait-associated n... 304
scDistill: Knowledge distillation for single-cell batch correction with covariat... 181
Multi-modal Disentanglement of Spatial Transcriptomics and Histopathology Imagin... 178
Generation of disentangled microenvironment-induced and intrinsic gene expressio... 159
Single-Cell Biological Insights via Optimal Transport (scBIOT) 91
Generation of disentangled microenvironment-induced and intrinsic gene expressio... 74