16 dependents
| Package | Description | Downloads/month |
|---|---|---|
| A framework for state-of-the-art pre-trained bio foundation models on genomics a... | 7K | |
| Large-scale generative pretrain of single cell using transformer. | 4K | |
| single cell foundation model for Gene network inference and more | 1K | |
| scPRINT-2 is a Large Cell Model for Gene Network Inference, Denoising and more f... | 463 | |
| Cell DISentangled Experts for Covariate counTerfactuals (CellDISECT). Causal gen... | 452 | |
| Convenient and user-friendly package to streamline common workflows in single-ce... | 404 | |
| Panpipes - multimodal single cell pipelines | 396 | |
| BENchmarking Transformer-Obtained Single-Cell embeddings | 373 | |
| A VAE framework for batch effect correction in biological data | 371 | |
| 272 | ||
| Lorentz-irecon VAE for Enhancing Single-cell Multi-omics Embeddings | 135 | |
| Correlated Latent Space Learning and Continuum Modeling of Single Cell Data | 121 | |
| Machine learning development environment for single-cell sequencing data analyse... | 120 | |
| Single-Cell Biological Insights via Optimal Transport (scBIOT) | 91 | |
| Harnessing the Power of Single Cell Large Language Models with Parameter Efficie... | 87 | |
| Inference of heterogeneous perturbation effects in single cell CRISPR screening ... | 80 |
