31 dependents
| Package | Description | Downloads/month |
|---|---|---|
| A Python package for handling and visualizing GWAS summary statistics. https://c... | 16K | |
| Analyse MalariaGEN data from Python | 6K | |
| Rapid population clustering with autoencoders | 2K | |
| 2K | ||
| Genetic Algorithm for Demographic Model Analysis | 2K | |
| A Python library for processing genomes with ease | 2K | |
| 1K | ||
| A deep learning tool for identifying hard and soft selective sweeps in populatio... | 1K | |
| Dataset generation and peak calling for multi-modal Next-Generation Sequencing d... | 1K | |
| A package to access insecticide resistance gene expression meta analyse in Anoph... | 1K | |
| Identify parents of a crossed individual by comparing identity in windows across... | 902 | |
| A simple python library to identify the most likely strain from the population | 755 | |
| Human mitochondrial variants annotation using HmtVar. | 693 | |
| Extended Cross-Population (ExP) Heatmap | 667 | |
| Repo for a package that generates UMI-gene dictionaries based on long reads, and... | 645 | |
| A python package to facilitate spatially explicit coalescent modeling in msprime | 500 | |
| 412 | ||
| 308 | ||
| Identify identity-by-descent (IBD) segments between pairs of individuals in huma... | 307 | |
| A web application for interactive visualization and exploratory data analysis of... | 302 | |
| Polarize genomes using diem | 269 | |
| A Python Package for Statistics for Adaptive Introgression | 234 | |
| DiploS/HIC | 228 | |
| A test python toolkit for variant site analysis | 226 | |
| Recombination Landscape Estimation using Recurrent Neural Networks | 200 | |
| HMM implementation to compute likelihoods from time series genetic under general... | 183 | |
| Variant annotator for MToolBox. | 172 | |
| Demographic inference from the distribution of pairwise segregating sites | 148 | |
| Python tools for the epiclines ERC project | 107 | |
| A package for pairplot and corrplot | 66 | |
| Repeat annotation tool | 52 |
