Dependents of scipion-em

43 dependents

Package	Description	Downloads/month
scipion-em-tomo	Base tomography Scipion plugin with data model definition	3K
scipion-em-relion	Plugin to use Relion SPA programs within the Scipion framework	2K
scipion-em-motioncorr	Plugin to use Motioncor2 program within the Scipion framework	2K
scipion-em-cryosparc2	Plugin to use cryoSPARC2 programs within the Scipion framework	1K
scipion-app	Base Scipion application that is based on pyworkflow and all extension plugins	1K
scipion-em-eman2	Plugin to use Eman2 SPA programs within the Scipion framework	1K
scipion-em-cryodrgn	Plugin to use cryoDRGN programs within the Scipion framework	994
scipion-em-cistem	Plugin to use cisTEM programs within the Scipion framework	880
scipion-em-sphire	Plugin to use Sphire programs within the Scipion framework	814
scipion-em-gctf	Plugin to use Gctf program within the Scipion framework	805
scipion-em-xmipptomo	Xmipp tomography protocols	672
scipion-em-warp	Plugin to use Warp programs within the Scipion framework	649
scipion-em-chimera	Plugin to use chimera programs within the Scipion framework	597
scipion-em-facilities	Plugin for Cryo-EM facilities to be used within Scipion framework	596
scipion-em-gautomatch	Plugin to use Gautomatch program within the Scipion framework	549
scipion-em-topaz	Plugin to use Topaz within the Scipion framework	549
scipion-em-modelangelo	Scipion plugin for ModelAngelo: an automatic atomic model building program for c...	546
scipion-em-cryoef	Plugin to use cryoEF program within the Scipion framework	463
scipion-em-spider	Plugin to use Spider programs within the Scipion framework	434
scipion-em-locscale	Plugin to use Locscale program within the Scipion framework	428
scipion-em-empiar	A Scipion plugin to make depositions to EMPIAR	422
scipion-em-imagic	Plugin to use IMAGIC programs within the Scipion framework	422
scipion-em-flexutils	Tools for 3D visualization and manipulation of flexibility data	408
scipion-em-cryoassess	Scipion plugin for MicAssess and 2DAssess programs	394
scipion-em-fsc3d	Plugin to use fsc3d within the Scipion framework	392
scipion-em-sidesplitter	Plugin to use Sidesplitter within the Scipion framework	380
scipion-em-tomotwin	Plugin to use TomoTwin within the Scipion framework	356
scipion-em-hax	Plugin to execute Hax package inside Scipion	321
scipion-em-opusdsd	Plugin to use OPUS-DSD programs within the Scipion framework	309
scipion-em-tomoviz	Tools for 3D visualization and manipulation of tomography data	282
scipion-em-emready	EMReady: Improvement of cryo-EM maps by simultaneous local and non-local deep le...	236
scipion-em-appion	Plugin to use Warp programs within the Scipion framework	235
scipion-em-roodmus	Roodmus plugin for Scipion	212
scipion-em-susantomo	Plugin to use Susan programs within the Scipion framework	192
scipion-em-xmippbase	Repository to provide base protocols and functionalities to scipion-em-xmipp and...	135
scipion-em-kiharalab	Scipion plugin that integrates Kiharalab's software.	132
scipion-em-carbonara	Scipion plugin that allows to run CARBonAra, a deep learning method for sampling...	109
scipion-chem-coprinet	Scipion framework plugin for the use of CoPriNet software tools	57
scipion-chem-retrosynthesis	Scipion framework plugin for the use of retrosynthesis software tools	55
scipion-em-emmivox	Scipion plugin emmivox	54
scipion-em-cryoten	Wrappers to CryoTen (https://github.com/jianlin-cheng/cryoten)	51
scipion-chem-toxcsm	Scipion framework plugin for the use of toxCSM software tool	47
scipion-chem-protox	Scipion framework plugin for the use of Protox software tool	37