11 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Opinionated, report-first CLI for single-cell and multi-omics analysis | 5K | |
| scXpand: detection of T-cell clonal expansion from single-cell RNA sequencing | 2K | |
| scXpand: detection of T-cell clonal expansion from single-cell RNA sequencing | 1K | |
| Scripts for using scanpy | 1K | |
| Celline - A comprehensive toolkit for single-cell RNA sequencing data analysis | 734 | |
| Single-cell data preprocessing for multiple samples. | 651 | |
| Single cell analysis of B cells | 541 | |
| Tools for single cell RNA sequencing pipelines | 499 | |
| Spatial transcriptome quality control, generate HTML QC report, obtain filtered ... | 425 | |
| Panpipes - multimodal single cell pipelines | 396 | |
| Custom modules for single cell analysis | 117 |
