338 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Supervisely SDK for Python - convenient way to automate, customize and extend Su... | 597K | |
| Super cool utilities that we just love to use | 101K | |
| PyTorch-based framework that handles segmentation/regression/classification usin... | 94K | |
| nnU-Net is a framework for out-of-the box image segmentation. | 87K | |
| Medical imaging processing for AI applications. | 81K | |
| Tool for robust segmentation of >100 important anatomical structures in CT and M... | 54K | |
| Computational Pathology Toolbox developed by TIA Centre, University of Warwick. | 32K | |
| Medical image processing in Python | 30K | |
| MedVAE is a family of six medical image autoencoders that can encode high-dimens... | 25K | |
| Tool for segmentation in bioimaging | 17K | |
| Radiomics features library for python | 15K | |
| RedBrick platform Python SDK! | 14K | |
| code for reading and processing Allen Institute for Brain Science data | 13K | |
| Tools to help with the conversion of DICOM images, RT Structures, and dose to us... | 8K | |
| Software for the Practical Analysis of Materials | 7K | |
| Convert3D tool | 6K | |
| Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord... | 6K | |
| A Python package for generating GMSH meshes from SCANCO HR-pQCT images | 6K | |
| Allen Institute for Neural Dynamics MRI utilities | 6K | |
| Python package for DICOM-SEG medical segmentation file reading and writing | 6K | |
| An AI-inference engine for 3D clinical and preclinical whole-body segmentation t... | 6K | |
| Transparent and reproducible medical image processing pipelines in Python. | 6K | |
| Details about the package | 5K | |
| MELAGE: An open-source Python toolkit for medical imaging (3D MRI & 3D ultrasoun... | 4K | |
| TEM data quantification library through a model-based approach | 4K | |
| A toolbox for annotating objects one by one in nD | 4K | |
| NeuroPoly fork of nnU-Net | 4K | |
| Very fast greedy diffeomorphic registration code | 4K | |
| Python package for DICOM-SEG medical segmentation file reading and writing | 4K | |
| Film dosimetry | 4K | |
| Automated lung segmentation in CT | 4K | |
| Pipeline for thigh ultrasound segmentation using nnU-Net and feature extraction | 4K | |
| Simulation for Medical Physics | 4K | |
| Multi-organ metabolic analysis framework | 4K | |
| Package to support the research of LIOM. | 4K | |
| Utilities for working with ZARR files and AIND metadata | 4K | |
| automatic update on release for pip and docker image | 3K | |
| A wrapper for loading medical 2D, 3D, and 4D image volumes via multiple backends... | 3K | |
| Segmentation and super resolution GAN network | 3K | |
| Python API to interact with MorphoNet | 3K | |
| Preprocessing of diffusion MRI | 3K | |
| Python Musculoskeletal Tools | 3K | |
| GUI software for photogrammetry-assisted probe targeting in electrophysiology | 3K | |
| PYthon RadioTherapy library | 3K | |
| Python package for analysis and visualization of functional ultrasound imaging d... | 3K | |
| helpful functions for handling biomedical-imaging data in DICOM or NIfTI format | 3K | |
| Pipeline for anatomic processing for macaque | 3K | |
| Python library for scientific analysis of microscopy data | 3K | |
| Torso Processing ToolBox | 3K | |
| Framework for handling image segmentation in the context of multiple annotators | 3K |
