63 dependents
| Package | Description | Downloads/month |
|---|---|---|
| This package provides a stable interface for interactions between Snakemake and ... | 1.5M | |
| A Snakemake storage plugin for Google Cloud Storage | 1M | |
| A Snakemake storage plugin for S3 API storage (AWS S3, MinIO, etc.) | 397K | |
| This is the development home of the workflow management system Snakemake. For ge... | 254K | |
| This package provides a stable interface for interactions between Snakemake and ... | 139K | |
| The interface for Snakemake report plugins. | 137K | |
| Logger plugin interface for snakemake | 136K | |
| Scheduler plugin interface for snakemake | 117K | |
| Generic cluster executor for Snakemake | 46K | |
| A Snakemake storage plugin that reads and writes from a locally mounted filesyst... | 40K | |
| Snakemake storage plugin for donwloading input files from HTTP(s). | 34K | |
| A Snakemake executor plugin for submitting jobs to a SLURM cluster | 18K | |
| A Snakemake storage plugin for handling input and output via XRootD | 14K | |
| A Snakemake executor plugin for running srun jobs inside of SLURM jobs (meant fo... | 14K | |
| Lightcone command-line toolchain | 2K | |
| A stable interface for Snakemake software deployment plugins | 2K | |
| A Snakemake executor plugin for submitting jobs to a LSF cluster | 1K | |
| A Snakemake storage plugin to read and write from Azure Blob Storage | 1K | |
| A Snakemake executor plugin for submitting jobs to Microsoft Azure Batch. | 1K | |
| A snakemake executor plugin for submission of jobs to Kubernetes | 774 | |
| A Snakemake software deployment plugin for using conda packages. Implemented usi... | 759 | |
| PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy Syste... | 678 | |
| 637 | ||
| Snakemake Report Plugin to automatically create Nanopubs after workflow runs hol... | 579 | |
| slurm executor for use by snakemake when running on the slurm flavor which is un... | 575 | |
| A snakemake executor plugin for submission of jobs to Kubernetes | 573 | |
| Run snakemake within a rootless container | 469 | |
| A Snakemake storage plugin that handles files available through Rucio. | 452 | |
| Snakemake executor plugin for Google Batch | 449 | |
| A Snakemake storage plugin that handles files and directories on an FTP server | 431 | |
| A Snakemake executor plugin for AWS Batch that uses pre-configured job definitio... | 407 | |
| A Snakemake executor plugin for AWS Batch | 403 | |
| Snakemake software deployment plugin for environment modules | 377 | |
| PyPSA-Eur: A Sector-Coupled Open Optimisation Model of the European Energy Syste... | 351 | |
| Snakemake storage plugin for reading and writing files on Microsoft SharePoint. | 321 | |
| A Snakemake executor plugin for running bjobs jobs inside of LSF jobs (meant for... | 310 | |
| A Snakemake executor plugin for submitting jobs to an HTCondor cluster. | 302 | |
| A Snakemake storage plugin for zenodo | 299 | |
| Snakemake storage plugin for handling input and output on iRODS | 269 | |
| A Snakemake executor plugin for generic cluster jobs that are executed synchrono... | 268 | |
| A snakemake executor plugin for submission of jobs via DRMAA. | 263 | |
| General Properties of FASTAs | 253 | |
| A Snakemake executor plugin for Huawei Donau scheduler | 234 | |
| Snakemake logger plugin for streaming events to STOMP message brokers | 223 | |
| A Snakemake storage plugin for the LHCb apd API. | 210 | |
| A Snakemake executor plugin for submitting jobs via GA4GH TES. | 204 | |
| A Snakemake storage plugin that handles files on an SFTP server. | 194 | |
| A Snakemake storage plugin for the DIRAC Data Management System (DMS). | 186 | |
| A snakemake executor plugin for the Flux scheduler | 176 | |
| 175 |
