PyPI Stats

snakemake-interface-executor-plugins

Packages that depend on this package
28 dependents
Package Description Downloads/month
snakemake snakemake
This is the development home of the workflow management system Snakemake. For ge... 257K
snakemake snakemake-executor-plugin-cluster-generic
Generic cluster executor for Snakemake 48K
snakemake snakemake-executor-plugin-slurm
A Snakemake executor plugin for submitting jobs to a SLURM cluster 18K
snakemake snakemake-executor-plugin-slurm-jobstep
A Snakemake executor plugin for running srun jobs inside of SLURM jobs (meant fo... 14K
snakemake-logger-plugin-rich
Log plugin for snakemake using Rich 5K
lightcone-cli
Lightcone command-line toolchain 2K
befh snakemake-executor-plugin-lsf
A Snakemake executor plugin for submitting jobs to a LSF cluster 1K
ihmeuw easylink
A tool that allows users to build and run highly configurable record linkage/ent... 1K
snakemake snakemake-executor-plugin-azure-batch
A Snakemake executor plugin for submitting jobs to Microsoft Azure Batch. 1K
snakemake snakemake-executor-plugin-kubernetes
A snakemake executor plugin for submission of jobs to Kubernetes 840
tdayris snakemake-executor-plugin-slurm-gustave-roussy
654
Daylily-Informatics snakemake-executor-plugin-pcluster-slurm
slurm executor for use by snakemake when running on the slurm flavor which is un... 589
deeporiginbio snakemake-executor-plugin-deeporigin
A snakemake executor plugin for submission of jobs to Kubernetes 587
snakemake-executor-plugin-latch
502
snakemake snakemake-executor-plugin-googlebatch
Snakemake executor plugin for Google Batch 467
radusuciu snakemake-executor-plugin-aws-basic-batch
A Snakemake executor plugin for AWS Batch that uses pre-configured job definitio... 419
snakemake snakemake-executor-plugin-aws-batch
A Snakemake executor plugin for AWS Batch 409
BEFH snakemake-executor-plugin-lsf-jobstep
A Snakemake executor plugin for running bjobs jobs inside of LSF jobs (meant for... 322
htcondor snakemake-executor-plugin-htcondor
A Snakemake executor plugin for submitting jobs to an HTCondor cluster. 308
Diet-Microbiome-Interactions-Lab bioinformatics-tools
General Properties of FASTAs 282
snakemake snakemake-executor-plugin-cluster-sync
A Snakemake executor plugin for generic cluster jobs that are executed synchrono... 273
snakemake snakemake-executor-plugin-drmaa
A snakemake executor plugin for submission of jobs via DRMAA. 269
snakemake-executor-plugin-donau
A Snakemake executor plugin for Huawei Donau scheduler 242
snakemake snakemake-executor-plugin-tes
A Snakemake executor plugin for submitting jobs via GA4GH TES. 207
snakemake snakemake-executor-plugin-flux
A snakemake executor plugin for the Flux scheduler 177
snakemake-executor-plugin-ihep
A Snakemake executor plugin for submitting jobs to an HTCondor cluster. 157
harvardinformatics snakemake-executor-plugin-cannon
A Snakemake executor plugin for submitting jobs to the Harvard Cannon cluster 6
snakemake-without-snakefile
Modified Snakemake library that supports defining workflows via strings without ... 1