18 dependents
| Package | Description | Downloads/month |
|---|---|---|
| sourmash plugin for improved plotting/viz and cluster examination. | 954 | |
| Bin Chicken - recovery of low abundance and taxonomically targeted metagenome as... | 741 | |
| fast command-line extensions for sourmash | 704 | |
| This is a library to validate and compare dna sequences | 662 | |
| A sketch-based surveillance platform | 528 | |
| 🧬 Deterministic vector embedding of genomes. | 487 | |
| sourmash plugin for improved output of containment search for metagenomes - DEPR... | 336 | |
| A tool to detect acquired AMR genes directly from long read sequencing data. | 331 | |
| fast search and gather extensions for sourmash | 308 | |
| download one or more NCBI genomes by accession | 300 | |
| sourmash plugin to calculate abundance profiles. | 300 | |
| Download and Sketch Data Directly | 287 | |
| sourmash plugin to do pangenomics. | 283 | |
| sourmash plugin to do tables. | 271 | |
| An Ensemble Machine Learning algorithm for classification of bacterial strains. | 187 | |
| sourmash plugin to build venn diagrams - DEPRECATED. Use 'sourmash_plugin_better... | 167 | |
| Python utilities for sourmash plugins and scripts | 160 | |
| An integrated tool for annotating the motif variation and complex patterns in ta... | 59 |
