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Dependencies
- anndata
- array-api-compat
- asttokens
- biom-format
- certifi
- charset-normalizer
- click
- clustergrammer2
- combat
- comm
- contourpy
- crc32c
- cycler
- decorator
- donfig
- executing
- fastcluster
- filelock
- fonttools
- fsspec
- h5py
- idna
- inmoose
- ipython
- ipython-pygments-lexers
- ipywidgets
- jedi
- jinja2
- joblib
- jupyterlab-widgets
- kiwisolver
- legacy-api-wrap
- markupsafe
- matplotlib
- matplotlib-inline
- mpmath
- narwhals
- natsort
- networkx
- numcodecs
- numpy
- packaging
- pandas
- parso
- patsy
- pexpect
- pillow
- plotly
- prompt-toolkit
- ptyprocess
- pure-eval
- pygments
- pyparsing
- python-dateutil
- pytz
- pyyaml
- requests
- scanpy
- scikit-bio
- scikit-learn
- scipy
- seaborn
- six
- stack-data
- statsmodels
- sympy
- threadpoolctl
- torch
- tqdm
- traitlets
- typing-extensions
- tzdata
- urllib3
- wcwidth
- widgetsnbextension
- zarr
12 optional dependencies
- anndata[docs]
- black[dev]
- ipykernel[dev]
- ipywidgets[docs]
- jupytext[docs]
- myst-nb[docs]
- pytest[dev]
- ruff[dev]
- sphinx[docs]
- sphinx-book-theme[docs]
- sphinx-copybutton[docs]
- sphinx-new-tab-link[docs]