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Dependencies
- click <=8.2.0
- cookiecutter <=2.1.1
- loguru <=0.7.2
- more-itertools
- numpy <=1.26.4
- pandas <=2.1.2
- polars <=1.6.0
- pulp <2.8.0
- pyarrow
- pybedtools
- pyranges <=0.1.2
- snakemake <=7.32.4
- snakemake-wrapper-utils
36 optional dependencies
- capcruncher-tools[full]
- click[full]
- cookiecutter[full]
- cooler[full]
- h5py[full]
- ibis-framework[full]
- loguru[full]
- matplotlib[full]
- more-itertools[full]
- multiqc[full]
- numpy[full]
- pandas[full]
- pandera[full]
- panel[full]
- papermill[full]
- plotly[full]
- polars[full]
- pulp[full]
- pyarrow[full]
- pybedtools[full]
- pydantic[full]
- pydeseq2[full]
- pyranges[full]
- pysam[full]
- quarto[full]
- ray[full]
- seaborn[full]
- snakemake[full]
- snakemake-wrapper-utils[full]
- toml[full]
- tqdm[full]
- trackhub[full]
- tracknado[full]
- ujson[full]
- xopen[full]
- xxhash[full]