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Dependencies
- cellmap-models
- daisy
- fastmorph
- fastremap
- flasgger
- flask
- flask-cors
- funlib-geometry
- funlib-math
- funlib-persistence ==0.6.1
- gunicorn
- h5py
- huggingface-hub
- marshmallow
- mwatershed
- neuroglancer
- numcodecs ==0.15.0
- numpy
- pydantic
- pymorton
- pyyaml
- s3fs
- scikit-image
- tensorstore
- torch
- universal-pathlib
- xarray ==2024.7.0
- zarr ==2.18.4
23 optional dependencies
- bioimageio-core[bioimageio]
- black[dev]
- cellpose[cellpose]
- dacapo-ml[dacapo]
- edt[postprocess]
- funlib-math[postprocess]
- jupytext[docs]
- mwatershed[postprocess]
- mypy[dev]
- myst-nb[docs]
- myst-parser[docs]
- nbsphinx[docs]
- pdbpp[dev]
- pre-commit[dev]
- pytest[test]
- pytest-cov[test]
- pytest-lazy-fixtures[test]
- rich[dev]
- ruff[dev]
- sphinx-autoapi[docs]
- sphinx-autodoc-typehints[docs]
- sphinx-click[docs]
- sphinx-rtd-theme[docs]