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Dependencies
- click
- configspace
- crc32c
- fpdf2
- gast >=0.3.3
- gdown
- glfw
- imageio
- imgui >=2.0.0
- matplotlib >=3.2
- numpy
- opencv-python-headless
- pandas
- parameterized
- pillow >=6.0.0
- protobuf <3.21
- pyarrow
- pyopengl
- pyperclip
- pyvips
- rasterio
- requests
- rich
- saliency
- scikit-image
- scikit-learn
- scipy
- seaborn <0.14
- shapely
- smac ==1.4.0
- tabulate
- tensorboard
- tqdm
- triangle
- umap-learn
- zarr
21 optional dependencies
- cellpose[torch]
- cucim[cucim-cuda12]
- cucim[cucim]
- cucim[cucim-cuda11]
- cupy-cuda11x[cucim-cuda11]
- cupy-cuda12x[cucim-cuda12]
- fastai[torch]
- pretrainedmodels[torch]
- pytorch-lightning[torch]
- segmentation-models-pytorch[torch]
- slideflow-gpl[all]
- slideflow-gpl[gpl]
- slideflow-noncommercial[noncommercial]
- slideflow-noncommercial[all]
- spacy[torch]
- tensorflow[tf]
- tensorflow-datasets[tf]
- tensorflow-probability[tf]
- timm[torch]
- torch[torch]
- torchvision[torch]