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Dependencies
- biopython >=1.81.0
- ipykernel >=6.0.0
- jsonapi-client >=0.9.9
- jupyterlab >=4.0.0
- marine-omics >=0.1.17
- matplotlib >=3.8.0
- matplotlib-venn >=1.1.2
- numpy >=1.25.0
- pandas >=2.0.0
- pydantic >=2.12.0
- pydeseq2 >=0.5.4
- requests >=2.31.0
- scikit-learn >=1.4.0
- scipy >=1.11.0
- seaborn >=0.13.0
- setuptools <81.0.0,>=68.0.0
- tqdm >=4.66.0
10 optional dependencies
- ipykernel[dev]
- jupyterlab[dev]
- mypy[dev]
- myst-parser[docs]
- pytest[dev]
- pytest-cov[dev]
- ruff[dev]
- sphinx[docs]
- sphinx-autodoc-typehints[docs]
- sphinx-rtd-theme[docs]