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Dependencies
- adjusttext ==1.1.1
- anndata ==0.8.0
- biopython ==1.79
- colour ==0.1.5
- dash-bootstrap-components ==1.5.0
- dash-daq ==0.5.0
- einops ==0.4.1
- elasticdeform
- intervaltree ==3.1.0
- kornia ==0.7.2
- leidenalg
- matplotlib ==3.5.2
- molmass
- numba ==0.57.1
- numpy ==1.21.6
- pandas ==1.4.2
- plotly ==5.10.0
- pyimzml ==1.5.3
- python-dotplot
- scanpy ==1.8.1
- scikit-learn ==0.24.1
- scipy ==1.10.0
- seaborn ==0.11.2
- shapely ==2.0.3
- sphinx-hoverxref ==1.3.0
- sphinx-rtd-theme ==1.2.0
- svgpathtools ==1.6.1
- tifffile
- umap-learn ==0.5.1
6 optional dependencies
- torch[gpu]
- torch[cpu]
- torchgeometry[cpu]
- torchgeometry[gpu]
- torchvision[cpu]
- torchvision[gpu]