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Dependencies
- cachetools >=6.2.4
- fsspec >=2025.9.0
- numcodecs <0.16,>=0.12.1
- numpy >=2.0.2
- pillow >=11.3.0
- pynrrd >=1.1.3
- pyyaml >=6.0.2
- requests >=2.32.5
- s3fs >=2025.9.0
- zarr <3,>=2
104 optional dependencies
- aiohttp[all]
- aiohttp[models]
- alphashape[all]
- alphashape[render]
- batchgenerators[models]
- batchgenerators[all]
- batchgeneratorsv2[all]
- batchgeneratorsv2[models]
- blosc2[all]
- blosc2[models]
- build[all]
- connected-components-3d[render]
- connected-components-3d[all]
- cucim-cu13[models]
- dask[models]
- dask[all]
- dask-image[all]
- dask-image[models]
- dynamic-network-architectures[models]
- dynamic-network-architectures[all]
- einops[all]
- einops[models]
- fft-conv-pytorch[models]
- fft-conv-pytorch[all]
- fsspec[volume-only]
- fvcore[all]
- fvcore[models]
- huggingface-hub[all]
- huggingface-hub[models]
- ipykernel[notebooks]
- jupyterlab[notebooks]
- libigl[render]
- libigl[all]
- lxml[models]
- lxml[all]
- magic-class[gui]
- magic-class[all]
- magicgui[all]
- magicgui[gui]
- matplotlib[notebooks]
- monai[all]
- monai[models]
- napari[gui]
- napari[all]
- nest-asyncio[blending]
- nest-asyncio[all]
- nest-asyncio[notebooks]
- nnunetv2[all]
- nnunetv2[models]
- numba[all]
- numba[models]
- numcodecs[volume-only]
- numpy[volume-only]
- open3d[render]
- open3d[all]
- opencv-contrib-python[render]
- opencv-contrib-python[all]
- opencv-python-headless[all]
- opencv-python-headless[render]
- pandas[models]
- pandas[all]
- pillow[volume-only]
- psutil[models]
- psutil[all]
- pybind11[all]
- pynrrd[volume-only]
- pyqt6[gui]
- pyqt6[all]
- pytest[tests]
- pytest[all]
- pytorch-lightning[models]
- pytorch-lightning[all]
- pytorch-optimizer[models]
- pytorch-optimizer[all]
- pyyaml[volume-only]
- requests[volume-only]
- s3fs[volume-only]
- scikit-image[models]
- scikit-image[all]
- scipy[blending]
- scipy[models]
- scipy[all]
- setuptools[all]
- simpleitk[render]
- simpleitk[all]
- tensorstore[models]
- tensorstore[all]
- tifffile[render]
- tifffile[all]
- timm[models]
- timm[all]
- torch[models]
- torch[all]
- tqdm[blending]
- tqdm[models]
- tqdm[all]
- trimesh[render]
- trimesh[all]
- typed-argument-parser[models]
- typed-argument-parser[all]
- wandb[all]
- wandb[models]
- wheel[all]
- zarr[volume-only]