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pnnl
hundo

:100: Snakemake-based amplicon processing protocol for 16S and ITS sequences.

1K 13 6
erinyoung
spestimator

A tool to predict bacterial species from fasta files using RefSeq 16S.

188 0 0
smdabdoub
qiime-tools

Tools for phylogenetic data analysis including visualization and cluster-computing support.

180 15 3
dizak
mothulity

Easy-to-use tool facilitating work with Mothur.

141 3 3
FOI-Bioinformatics
flextaxd

FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )

75 67 8
SushiLab
mtags

mTAGs - taxonomic profiling using degenerate consensus reference sequences of ribosomal RNA gene.

69 6 2
smdabdoub
phylotoast

Tools for phylogenetic data analysis including visualization and cluster-computing support.

64 15 3