Search Packages

gget

🧬 gget enables efficient querying of genomic reference databases

synth-pdb

Generate realistic PDB files with mixed secondary structures for testing, education and bioinformatics tool development

alphafoldfetch

A tool for downloading AlphaFold structures using UniProt IDs or FASTA files

rafm

Reliable AlphaFold Measures

alphafold3

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch

invariant-attention

An implementation of Invariant Point Attention from Deepmind's Alphafold 2

ensemblify

Ensemblify is a computational tool that generates ensembles of intrinsically disordered regions from AlphaFold or user-defined models. It provides a user-friendly way to generate, analyze and reweight (against experimental data) ensembles, making it accessible to all members of the scientific community, independent of their programming expertise.

open-af3

Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch