Search Packages

spada

⚔️ Find splicing-led, functional changes of the proteome.

spycone

Splicing-aware time-course network enricher - exploratory analysis for transcriptomics and/or proteomics time series data

thoraxe

Use Thor's Axe to cut exons into their evolutionary building blocks :zap:

nease

A network-based approach for exon set enrichment

altanalyze3

AltAnalyze3: Advanced RNA-Seq Analysis Workflow

astk

A comprehensive toolkit for alternative splicing analysis

yasim

Yet Another SIMulator for Alternative Splicing Events and Realistic Gene Expression Profile

transcriptorthology

Algorithm to infer clusters of isoorthologous transcripts using gene-level homology relationships and a Reciprocal Best Hits approach