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rhpvorderman
sequali

Fast sequencing data quality metrics

8K 33 1
sbslee
fuc

Frequently used commands in bioinformatics

7K 58 8
blockresearchgroup
compas-model

A universal model datastructure for design, analysis, fabrication, and construction

5K 8 3
TRON-Bioinformatics
vafator

Annotate variants in a VCF file with technical annotations from one or more BAMs

3K 10 0
ronin-gw
pymasc

Python implementation to calc mappability-sensitive cross-correlation for fragment length estimation and quality control for ChIP-Seq.

1K 2 0
ylab-hi
chimeralm

A language model enables accurate structural variant detection in whole-genome amplified long-read sequencing

560 3 0
mbhall88
fast5seek

Get paths for fast5 files contained in BAM, SAM, or fastq.

118 12 2
innovate-invent
bampy

Python implementation of htslib supporting BAM, SAM, and BGZF compression

48 1 0
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