Search Packages

gilda

Grounding of biomedical named entities with contextual disambiguation

cumulus-etl

Extract FHIR data, Transform with NLP and DEID tools, and then Load FHIR data into a SQL Database for analysis

cumulus-library

A framework for designing, executing, and distributing SQL queries packaged as "studies", e.g., for quality monitoring, clinical research, or public health

gilda-slim

Grounding for biomedical entities with contextual disambiguation

smart-fetch

Fetch FHIR data from your EHR easily and completely

bdi-kit

A toolkit for biomedical data integration and harmonization

cumulus-library-data-metrics

Data quality and characterization metrics for Cumulus

cumulus-library-umls

A Unified Medical Language System® Metathesaurus study for the Cumulus project

magneto-python

Magneto Python library

midrc-melody

MELODY: Model EvaLuation across subgroups for cOnsistent Decision accuracY

cumulus-library-catalog

Catalog hierarchies for Dx, Rx, Labs, and other FHIR resource types

cumulus-library-kidney-transplant

kidney transplant irAE (immuno related adverse events) related to immunosuppressive Medications post transplant

bdi-viz

bdi-viz library