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brian-team
brian2

Brian is a free, open source simulator for spiking neural networks.

44K 1K 284
openbraininstitute
bluepyopt

Blue Brain Python Optimisation Library

15K 8 0
brian-team
brian2cuda

A brian2 extension to simulate spiking neural networks on GPUs

1K 73 21
BjornFJohansson
ypkpathway

Automatic pathway assembly with the YeastPathwayKit

901 2 1
PMEAL
pytrax

Random walk to calculate the tortuosity tensor of images

380 34 18
Edinburgh-Genome-Foundry
topkappy

:waxing_gibbous_moon: Pythonic bindings for the Kappa model simulation language

158 5 0
Edinburgh-Genome-Foundry
kappagate

Predict valid-clone-rates in Golden Gate DNA assemblies

94 10 0
briandconnelly
hankshaw

Model, Data, and Analysis Scripts for "The Evolution of Cooperation by the Hankshaw Effect"

78 1 2
Bluejee
mnest

MNEST (Multi-agent Neuro Evolution Simulation Toolkit) is a software framework designed to model and study emergent behavior in complex systems

62 7 7