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scikit-learn-contrib
hdbscan

A high performance implementation of HDBSCAN clustering.

2.3M 3K 532
Liang-Team
sequenzo

A fast, scalable, and intuitive Python package in sequence analysis.

10K 34 10
gagolews
genieclust

Genie: Fast and Robust Hierarchical Clustering

9K 73 12
gagolews
quitefastmst

quitefastmst: Euclidean and Mutual Reachability Minimum Spanning Trees

3K 1 0
lachhebo
pyclustertend

A python package to assess cluster tendency

2K 50 11
draster2k
trcc

Density-peak clustering with path-density mutual-reachability merging. Sub-quadratic O(n log n) via a C++ pybind11/nanoflann kd-tree. 30× speedup at n=50k.

2K 1 0
gagolews
lumbermark

Lumbermark: Resistant Clustering via Chopping Up Mutual Reachability Minimum Spanning Trees

1K 0 0
alashkov83
s-dbw

S_Dbw validity index. Adapted for DBSCAN (and similar)

801 12 5
LuisScoccola
persistable-clustering

Density-based clustering for exploratory data analysis based on multi-parameter persistence

745 42 2
gagolews
clustering-benchmarks

A Framework for Benchmarking Clustering Algorithms

640 44 8
eren-ck
finchpy

A Python implementation of "FINCH Clustering Algorithm (CVPR 2019)"

611 9 2
EAkeweje
gpmix

A library for efficient uncovering of latent cluster labels in functional data from Gaussian process mixtures.

558 5 1
jo-phil
hopkins-statistic

Compute the Hopkins statistic to assess clustering tendency.

393 1 0
clusterking
clusterking

Cluster sets of histograms/curves, in particular kinematic distributions in high energy physics.

350 12 2
instamatic-dev
edtools

Collection of tools for automated processing and clustering of electron diffraction data

267 13 10
volfpeter
localclustering

Python 3 implementation and documentation of the Hermina-Janos local graph clustering algorithm.

213 24 1
ear-team
bambird

Unsupervised classification to improve the quality of a bird song recording dataset. https://doi.org/10.1016/j.ecoinf.2022.101952

205 31 7
xGabrielR
cluster-ss

Python cluster-ss Package

199 0 0
hugo-strang
silhouette-upper-bound

An upper bound of the Average Silhouette Width

181 7 1
semoglou
composite-silhouette

A clustering evaluation framework that combines micro- and macro-averaged silhouette scores into a composite metric using statistical weighting.

156 1 1
MBAigner
pdfsegmenter

This library builds a graph-representation of the content of PDFs. The graph is then clustered, resulting page segments are classified and returned. Tables are retrieved formatted as a CSV.

117 23 3
bajor
categorical-cluster

My algo and library for clustering categorical data

114 0 0
SalmanFarizN
pybdynamics

Functions for BD simulations and data-analysis

97 0 0
akthammomani
clusterlens

ClusterLens is an interpretability engine for clustered / segmented data.

86 1 0
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